如何解决在 R 中运行 Latex 时如何解决此错误?
msaPrettyPrint(seq_mapped,output="pdf",showNames="none",showlogo="none",askForOverwrite=FALSE,verbose=FALSE)
和错误:
Error in texi2dvi(texfile,quiet = !verbose,pdf = identical(output,"pdf"),:
unable to run pdflatex on 'seq_mapped.tex'
LaTeX errors:
! Paragraph ended before \inf@@get was complete.
<to be read again>
\par
l.25 ...e}{/tmp/RtmppWEuqI/seq108d544be5486.fasta}
! Misplaced alignment tab character &.
\msfline ->\par &
& & & @
l.25 ...e}{/tmp/RtmppWEuqI/seq108d544be5486.fasta}
! Misplaced alignment tab character &.
\msfline ->\par & &
& & @
l.25 ...e}{/tmp/RtmppWEuqI/seq108d544be5486.fasta}
! Misplaced alignment tab character &.
\msfline ->\par & & &
& @
l.25 ...e}{/tmp/RtmppWEuqI/seq108d544be5486.fasta}
! Misplaced alignment tab character &.
\msfline ->\par & & & &
@
l.25 ...e}{/tmp/RtmppWEuqI/seq108d544be5486.fasta}
我也试过:
msaPrettyPrint(seq_mapped,output="tex",verbose=FALSE)
tools::texi2pdf("seq_mapped.tex",clean=TRUE)
但还是有错误
Error in texi2dvi(file = file,pdf = TRUE,clean = clean,quiet = quiet,:
Running 'texi2dvi' on 'seq_mappedt.tex' Failed.
LaTeX errors:
! LaTeX Error: File `texshade.sty' not found.
Type X to quit or <RETURN> to proceed,or enter new name. (Default extension: sty)
! Emergency stop.
<read *>
l.4 ^^M
! ==> Fatal error occurred,no output PDF file produced!
但是,texshade.sty
已安装:
system.file("tex","texshade.sty",package="msa")
[1] ".../R/x86_64-pc-linux-gnu-library/4.1/msa/tex/texshade.sty"
有什么想法吗? 仅供参考:Ubuntu 20.04.2 LTS 焦点
谢谢
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